As a note, if you blink an SC then you may or may not get a message in the log depending on when you blink. I've had that happen before.
Now why it's doing it with blinkmenot up? I'm not sure. Are you blinking at all? I know that blinkmenot's default settings are different now so you may need to configure it to make sure you don't blink.
Best test you can do is find a mob you know the hp value for and do a few self scs on it. If afterward the mob is at a lower% than expected for the damage your ws and spell did then you know it worked even if you can't see the damage.
The only other thing I can think of is that you're just timing it wrong or have exceptional lag.
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