She's always been trying to please the company/her father , she now has found someone else who is just like her, and in a way if she's able to make him think for herself then she too will be brave enough to do so. She just needs someone else to help her get on her path to freedom.
That's the feeling I'm getting from her. Rather than "Turning Sylar evil" it's more "Breaking away the commands of power"
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